IL_9Y4G_220

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

9Y4G|1|B2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|G|952
9Y4G|1|B2|C|953
9Y4G|1|B2|U|954
9Y4G|1|B2|A|955
9Y4G|1|B2|G|956
*
9Y4G|1|B2|C|967
9Y4G|1|B2|U|968
9Y4G|1|B2|U|969
9Y4G|1|B2|G|970
9Y4G|1|B2|G|971
9Y4G|1|B2|A|972
9Y4G|1|B2|C|973
9Y4G|1|B2|C|974

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain AB

40S ribosomal protein S3a

Chain AO

40S ribosomal protein S14

Chain CA

60S ribosomal protein L8