IL_9Y4G_221

3D structure

PDB id

9Y4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGGUUC*GUU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y4G|1|B2|A|1042
9Y4G|1|B2|G|1043
9Y4G|1|B2|G|1044
9Y4G|1|B2|U|1045
9Y4G|1|B2|U|1046
9Y4G|1|B2|C|1047
*
9Y4G|1|B2|G|1071
9Y4G|1|B2|U|1072
9Y4G|1|B2|U|1073

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain A6

Large subunit ribosomal RNA; LSU rRNA

Chain AO

40S ribosomal protein S14

Chain Aa

40S ribosomal protein S26

Chain CA

60S ribosomal protein L8

Chain Cp

60S ribosomal protein L37a