IL_9Y79_136

3D structure

PDB id

9Y79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC^walked) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Y79|1|a|U|1851
9Y79|1|a|U|1852
9Y79|1|a|A|1853
9Y79|1|a|A|1854
9Y79|1|a|U|1855
9Y79|1|a|U|1856
9Y79|1|a|G|1857
9Y79|1|a|A|1858
9Y79|1|a|U|1859
9Y79|1|a|G|1860
*
9Y79|1|a|U|1882
9Y79|1|a|U|1883
9Y79|1|a|G|1884
9Y79|1|a|A|1885
9Y79|1|a|U|1886
9Y79|1|a|C|1887
9Y79|1|a|G|1888
9Y79|1|a|A|1889
9Y79|1|a|A|1890
9Y79|1|a|G|1891

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA