IL_9YPY_049

3D structure

PDB id

9YPY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome with accommodated A-site tRNA, Structure V

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9YPY|1|5|G|1425
9YPY|1|5|G|1426
9YPY|1|5|A|1427
9YPY|1|5|U|1428
9YPY|1|5|C|1429
*
9YPY|1|5|G|1455
9YPY|1|5|C|1456
9YPY|1|5|G|1457
9YPY|1|5|C|1458
9YPY|1|5|A|1459
9YPY|1|5|C|1460

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Q

Ribosomal protein L18

Chain b

Large ribosomal subunit protein eL29