IL_9ZTL_033

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

9ZTL|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_033 not in the Motif Atlas

Homologous match to IL_6CZR_141

Geometric discrepancy: 0.2018

The information below is about IL_6CZR_141

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

9ZTL|1|A|U|662
9ZTL|1|A|A|663
9ZTL|1|A|G|664
9ZTL|1|A|A|665
9ZTL|1|A|G|666
*
9ZTL|1|A|U|740
9ZTL|1|A|G|741
9ZTL|1|A|G|742
9ZTL|1|A|A|743

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S6

Chain O

30S ribosomal protein S15

Chain R

30S ribosomal protein S18