J3_11IQ_030
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AGAUG*CAGU*AGGGUGUAAAU
- Length
- 20 nucleotides
- Bulged bases
- 11IQ|1|28|U|2763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_11IQ_030 not in the Motif Atlas
- Homologous match to J3_8GLP_006
- Geometric discrepancy: 0.1985
- The information below is about J3_8GLP_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11IQ|1|28|A|2551
11IQ|1|28|G|2552
11IQ|1|28|A|2553
11IQ|1|28|U|2554
11IQ|1|28|G|2555
*
11IQ|1|28|C|2572
11IQ|1|28|A|2573
11IQ|1|28|G|2574
11IQ|1|28|U|2575
*
11IQ|1|28|A|2757
11IQ|1|28|G|2758
11IQ|1|28|G|2759
11IQ|1|28|G|2760
11IQ|1|28|U|2761
11IQ|1|28|G|2762
11IQ|1|28|U|2763
11IQ|1|28|A|2764
11IQ|1|28|A|2765
11IQ|1|28|A|2766
11IQ|1|28|U|2767
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 27
- 60S ribosomal protein L27
Coloring options: