J3_1HR2_001
3D structure
- PDB id
- 1HR2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.25 Å
Loop
- Sequence
- CAAG*UGGC*GGUAUG
- Length
- 14 nucleotides
- Bulged bases
- 1HR2|1|A|U|179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1HR2_001 not in the Motif Atlas
- Geometric match to J3_1GID_002
- Geometric discrepancy: 0.0556
- The information below is about J3_1GID_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23680.1
- Basepair signature
- cWW-F-tHS-F-tHS-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
1HR2|1|A|C|138
1HR2|1|A|A|139
1HR2|1|A|A|140
1HR2|1|A|G|141
*
1HR2|1|A|U|162
1HR2|1|A|G|163
1HR2|1|A|G|164
1HR2|1|A|C|165
*
1HR2|1|A|G|175
1HR2|1|A|G|176
1HR2|1|A|U|177
1HR2|1|A|A|178
1HR2|1|A|U|179
1HR2|1|A|G|180
Current chains
- Chain A
- P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN
Nearby chains
- Chain B
- P4-P6 DELC209 MUTANT RNA RIBOZYME DOMAIN
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