Motif J3_23680.1 Version J3_23680.1 of this group appears in releases 3.84 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-7 | 3-6 | 4-5 | 8-9 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_2R8S_001 | 2R8S | 0.0000 | 1 | R | P4-P6 RNA RIBOZYME DOMAIN | C | 138 | A | 139 | A | 140 | G | 141 | * | U | 162 | G | 163 | G | 164 | C | 165 | * | G | 175 | G | 176 | U | 177 | A | 178 | G | 180 | cWW | tHS | tHS | cWW | cWW |
| 2 | J3_1GID_002 | 1GID | 0.1942 | 1 | B | P4-P6 RNA RIBOZYME DOMAIN | C | 138 | A | 139 | A | 140 | G | 141 | * | U | 162 | G | 163 | G | 164 | C | 165 | * | G | 175 | G | 176 | U | 177 | A | 178 | G | 180 | cWW | tHS | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAG*UGGC*GGUAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*GG*GUAU | 2 |
Release history
| Release | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-tHS-F-tHS-F-cWW-cWW
- Heat map statistics
- Min 0.19 | Avg 0.10 | Max 0.19
Coloring options: