J3_1I94_001
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAG*CGAAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 1I94|1|A|U|848
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1I94_001 not in the Motif Atlas
- Homologous match to J3_4LFB_001
- Geometric discrepancy: 0.0917
- The information below is about J3_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_02285.1
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
1I94|1|A|C|809
1I94|1|A|U|810
1I94|1|A|A|811
1I94|1|A|G|812
*
1I94|1|A|C|834
1I94|1|A|G|835
1I94|1|A|A|836
1I94|1|A|A|837
1I94|1|A|G|838
*
1I94|1|A|C|845
1I94|1|A|G|846
1I94|1|A|U|847
1I94|1|A|U|848
1I94|1|A|A|849
1I94|1|A|A|850
1I94|1|A|G|851
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain H
- 30S RIBOSOMAL PROTEIN S8
Coloring options: