J3_1I94_013
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 1I94|1|A|A|636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1I94_013 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.1001
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.5
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
1I94|1|A|C|569
1I94|1|A|G|570
1I94|1|A|G|571
*
1I94|1|A|C|634
1I94|1|A|U|635
1I94|1|A|A|636
1I94|1|A|G|637
1I94|1|A|A|638
*
1I94|1|A|U|734
1I94|1|A|G|735
1I94|1|A|A|736
1I94|1|A|C|737
1I94|1|A|G|738
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain H
- 30S RIBOSOMAL PROTEIN S8
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain O
- 30S RIBOSOMAL PROTEIN S15
- Chain Q
- 30S RIBOSOMAL PROTEIN S17
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