J3_1I94_014
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 1I94|1|A|U|706
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1I94_014 not in the Motif Atlas
- Homologous match to J3_4LFB_012
- Geometric discrepancy: 0.1352
- The information below is about J3_4LFB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_74074.1
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
1I94|1|A|U|655
1I94|1|A|G|656
*
1I94|1|A|C|700
1I94|1|A|G|701
1I94|1|A|C|702
1I94|1|A|C|703
1I94|1|A|G|704
1I94|1|A|A|705
1I94|1|A|U|706
1I94|1|A|G|707
1I94|1|A|G|708
*
1I94|1|A|C|715
1I94|1|A|A|716
1I94|1|A|G|717
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain F
- 30S RIBOSOMAL PROTEIN S6
- Chain K
- 30S RIBOSOMAL PROTEIN S11
- Chain R
- 30S RIBOSOMAL PROTEIN S18
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