J3_1I95_001

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CUAG*CGAAG*CGUUAAG

Length

16 nucleotides

Bulged bases

1I95|1|A|U|848, 1I95|1|A|A|850

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_1I95_001 not in the Motif Atlas

Homologous match to J3_4LFB_001

Geometric discrepancy: 0.1117

The information below is about J3_4LFB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

1I95|1|A|C|809
1I95|1|A|U|810
1I95|1|A|A|811
1I95|1|A|G|812
*
1I95|1|A|C|834
1I95|1|A|G|835
1I95|1|A|A|836
1I95|1|A|A|837
1I95|1|A|G|838
*
1I95|1|A|C|845
1I95|1|A|G|846
1I95|1|A|U|847
1I95|1|A|U|848
1I95|1|A|A|849
1I95|1|A|A|850
1I95|1|A|G|851

Current chains

Chain A

16S RRNA

Nearby chains

Chain H

30S RIBOSOMAL PROTEIN S8