J3_1I95_015

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

1I95|1|A|U|1193, 1I95|1|A|C|1195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_1I95_015 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1807

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

1I95|1|A|C|967
1I95|1|A|U|968
1I95|1|A|U|969
1I95|1|A|G|970
1I95|1|A|A|971
1I95|1|A|C|972
1I95|1|A|A|973
1I95|1|A|U|974
*
1I95|1|A|A|1026
1I95|1|A|C|1027
1I95|1|A|A|1028
1I95|1|A|G|1029
*
1I95|1|A|C|1191
1I95|1|A|U|1192
1I95|1|A|U|1193
1I95|1|A|A|1194
1I95|1|A|C|1195
1I95|1|A|G|1196

Current chains

Chain A

16S RRNA

Nearby chains

Chain N

30S RIBOSOMAL PROTEIN S14