J3_1MFQ_002

3D structure

PDB id

1MFQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure Analysis of a Ternary S-Domain Complex of Human Signal Recognition Particle

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UC*GCCUAAGG*CG

Length

12 nucleotides

Bulged bases

1MFQ|1|A|C|169

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_70599.1

Basepair signature

cWW-F-cWW-F-F-cWW-F-F

Number of instances in this motif group

3

Unit IDs

1MFQ|1|A|U|128
1MFQ|1|A|C|129
*
1MFQ|1|A|G|168
1MFQ|1|A|C|169
1MFQ|1|A|C|170
1MFQ|1|A|U|171
1MFQ|1|A|A|172
1MFQ|1|A|A|173
1MFQ|1|A|G|174
1MFQ|1|A|G|175
*
1MFQ|1|A|C|221
1MFQ|1|A|G|222

Current chains

Chain A

7S RNA of human SRP

Nearby chains