J3_1NWY_006
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AUUG*CUAAC*GGACCGU
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1NWY_006 not in the Motif Atlas
- Geometric match to J3_4V9F_007
- Geometric discrepancy: 0.385
- The information below is about J3_4V9F_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_86017.1
- Basepair signature
- cWW-F-F-F-F-cWW-F-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
1NWY|1|0|A|2073
1NWY|1|0|U|2074
1NWY|1|0|U|2075
1NWY|1|0|G|2076
*
1NWY|1|0|C|2179
1NWY|1|0|U|2180
1NWY|1|0|A|2181
1NWY|1|0|A|2182
1NWY|1|0|C|2183
*
1NWY|1|0|G|2202
1NWY|1|0|G|2203
1NWY|1|0|A|2204
1NWY|1|0|C|2205
1NWY|1|0|C|2206
1NWY|1|0|G|2207
1NWY|1|0|U|2208
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain A
- ribosomal protein L2
- Chain F
- ribosomal protein L9
- Chain Y
- ribosomal protein L31
Coloring options: