J3_1VW3_004
3D structure
- PDB id
- 1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial large ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAG*UGUAGAC*GUA
- Length
- 14 nucleotides
- Bulged bases
- 1VW3|1|A|U|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1VW3_004 not in the Motif Atlas
- Geometric match to J3_4V9F_006
- Geometric discrepancy: 0.1442
- The information below is about J3_4V9F_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_19545.2
- Basepair signature
- cWW-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
1VW3|1|A|U|1337
1VW3|1|A|A|1338
1VW3|1|A|A|1339
1VW3|1|A|G|1340
*
1VW3|1|A|U|1557
1VW3|1|A|G|1558
1VW3|1|A|U|1559
1VW3|1|A|A|1560
1VW3|1|A|G|1561
1VW3|1|A|A|1562
1VW3|1|A|C|1563
*
1VW3|1|A|G|1572
1VW3|1|A|U|1573
1VW3|1|A|A|1574
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: