J3_22TU_029

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AGAUUAAG*CGCGCAAAU*AGU

Length

20 nucleotides

Bulged bases

22TU|1|S2|A|46

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|A|40
22TU|1|S2|G|41
22TU|1|S2|A|42
22TU|1|S2|U|43
22TU|1|S2|U|44
22TU|1|S2|A|45
22TU|1|S2|A|46
22TU|1|S2|G|47
*
22TU|1|S2|C|479
22TU|1|S2|G|480
22TU|1|S2|C|481
22TU|1|S2|G|482
22TU|1|S2|C|483
22TU|1|S2|A|484
22TU|1|S2|A|485
22TU|1|S2|A|486
22TU|1|S2|U|487
*
22TU|1|S2|A|512
22TU|1|S2|G|513
22TU|1|S2|U|514

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain SX

40S ribosomal protein S23