J3_23WI_029
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 23WI|1|a|U|1212, 23WI|1|a|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_23WI_029 not in the Motif Atlas
- Homologous match to J3_6CZR_063
- Geometric discrepancy: 0.193
- The information below is about J3_6CZR_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.1
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 3
Unit IDs
23WI|1|a|C|990
23WI|1|a|U|991
23WI|1|a|U|992
23WI|1|a|G|993
23WI|1|a|A|994
23WI|1|a|C|995
23WI|1|a|A|996
23WI|1|a|U|997
*
23WI|1|a|A|1044
23WI|1|a|C|1045
23WI|1|a|A|1046
23WI|1|a|G|1047
*
23WI|1|a|C|1210
23WI|1|a|U|1211
23WI|1|a|U|1212
23WI|1|a|A|1213
23WI|1|a|C|1214
23WI|1|a|G|1215
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain n
- Small ribosomal subunit protein uS14
Coloring options: