J3_23WI_031
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_23WI_031 not in the Motif Atlas
- Homologous match to J3_6CZR_079
- Geometric discrepancy: 0.185
- The information below is about J3_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89145.1
- Basepair signature
- cWW-tSS-F-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
23WI|1|a|U|1073
23WI|1|a|G|1074
*
23WI|1|a|U|1083
23WI|1|a|G|1084
23WI|1|a|U|1085
23WI|1|a|U|1086
*
23WI|1|a|G|1099
23WI|1|a|C|1100
23WI|1|a|A|1101
23WI|1|a|A|1102
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain b
- Small ribosomal subunit protein uS2
- Chain e
- Small ribosomal subunit protein uS5
- Chain u
- Small ribosomal subunit protein bS21
Coloring options: