J3_28LN_007

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUU(PSU)

Length

18 nucleotides

Bulged bases

28LN|1|A2|G|991

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|A2|A|938
28LN|1|A2|U|939
28LN|1|A2|U|940
28LN|1|A2|C|941
*
28LN|1|A2|G|985
28LN|1|A2|G|986
28LN|1|A2|A|987
28LN|1|A2|C|988
28LN|1|A2|C|989
28LN|1|A2|A|990
28LN|1|A2|G|991
28LN|1|A2|A|992
28LN|1|A2|G|993
*
28LN|1|A2|C|1000
28LN|1|A2|A|1001
28LN|1|A2|U|1002
28LN|1|A2|U|1003
28LN|1|A2|PSU|1004

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AB

40S ribosomal protein S3a

Chain AN

40S ribosomal protein S13

Chain AO

40S ribosomal protein S14

Chain AR

40S ribosomal protein S17

Chain Aa

40S ribosomal protein S26

Chain Bp

60S ribosomal protein L37a