J3_28LN_020

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUGAAAAG*CG*CA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|380
28LN|1|B5|U|381
28LN|1|B5|G|382
28LN|1|B5|A|383
28LN|1|B5|A|384
28LN|1|B5|A|385
28LN|1|B5|A|386
28LN|1|B5|G|387
*
28LN|1|B5|C|414
28LN|1|B5|G|415
*
28LN|1|B8|C|19
28LN|1|B8|A|20

Current chains

Chain B5

28S rRNA

Chain B8

5.8S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BY

60S ribosomal protein L26

Chain Bl

60S ribosomal protein L39