J3_28LN_027

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAC*GCUAAGG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|G|1968
28LN|1|B5|A|1969
28LN|1|B5|C|1970
*
28LN|1|B5|G|1994
28LN|1|B5|C|1995
28LN|1|B5|U|1996
28LN|1|B5|A|1997
28LN|1|B5|A|1998
28LN|1|B5|G|1999
28LN|1|B5|G|2000
*
28LN|1|B5|C|2015
28LN|1|B5|A|2016
28LN|1|B5|C|2017

Current chains

Chain B5

28S rRNA

Nearby chains

Chain Bs

60S acidic ribosomal protein P0

Chain Bt

Large ribosomal subunit protein uL11