J3_28LN_028

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAAGUG*CAA*UCUG

Length

14 nucleotides

Bulged bases

28LN|1|B5|A|2395

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|2392
28LN|1|B5|G|2393
28LN|1|B5|A|2394
28LN|1|B5|A|2395
28LN|1|B5|G|2396
28LN|1|B5|U|2397
28LN|1|B5|G|2398
*
28LN|1|B5|C|2804
28LN|1|B5|A|2805
28LN|1|B5|A|2806
*
28LN|1|B5|U|2818
28LN|1|B5|C|2819
28LN|1|B5|U|2820
28LN|1|B5|G|2821

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BR

60S ribosomal protein L19

Chain Bg

60S ribosomal protein L34