J3_28LN_032

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|A|2550
28LN|1|B5|G|2551
28LN|1|B5|A|2552
28LN|1|B5|U|2553
28LN|1|B5|G|2554
*
28LN|1|B5|C|2571
28LN|1|B5|A|2572
28LN|1|B5|G|2573
28LN|1|B5|U|2574
*
28LN|1|B5|A|2756
28LN|1|B5|G|2757
28LN|1|B5|G|2758
28LN|1|B5|G|2759
28LN|1|B5|U|2760
28LN|1|B5|G|2761
28LN|1|B5|U|2762
28LN|1|B5|A|2763
28LN|1|B5|A|2764
28LN|1|B5|A|2765
28LN|1|B5|U|2766

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BZ

60S ribosomal protein L27