J3_28LN_035

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

28LN|1|B5|G|4075

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|C|3936
28LN|1|B5|G|3937
28LN|1|B5|G|3938
*
28LN|1|B5|C|4073
28LN|1|B5|U|4074
28LN|1|B5|G|4075
28LN|1|B5|A|4076
28LN|1|B5|C|4077
*
28LN|1|B5|G|4167
28LN|1|B5|G|4168
28LN|1|B5|A|4169
28LN|1|B5|C|4170
28LN|1|B5|A|4171
28LN|1|B5|G|4172

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BA

Large ribosomal subunit protein uL2

Chain BG

60S ribosomal protein L7a

Chain BN

60S ribosomal protein L15

Chain Bi

60S ribosomal protein L36