J3_28LN_038

3D structure

PDB id

28LN (explore in PDB, NAKB, or RNA 3D Hub)

Description

XBP1u-stalled RPL4 RNC in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAUC*GU(PSU)*ACUAAUA

Length

14 nucleotides

Bulged bases

28LN|1|B5|A|4463, 28LN|1|B5|U|4464

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

28LN|1|B5|U|4462
28LN|1|B5|A|4463
28LN|1|B5|U|4464
28LN|1|B5|C|4465
*
28LN|1|B5|G|4490
28LN|1|B5|U|4491
28LN|1|B5|PSU|4492
*
28LN|1|B5|A|4506
28LN|1|B5|C|4507
28LN|1|B5|U|4508
28LN|1|B5|A|4509
28LN|1|B5|A|4510
28LN|1|B5|U|4511
28LN|1|B5|A|4512

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL3

Chain BV

60S ribosomal protein L23