J3_30RB_027

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CUG*CUAAC*GGACAG

Length

14 nucleotides

Bulged bases

30RB|1|a|A|2198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|C|2091
30RB|1|a|U|2092
30RB|1|a|G|2093
*
30RB|1|a|C|2196
30RB|1|a|U|2197
30RB|1|a|A|2198
30RB|1|a|A|2199
30RB|1|a|C|2200
*
30RB|1|a|G|2223
30RB|1|a|G|2224
30RB|1|a|A|2225
30RB|1|a|C|2226
30RB|1|a|A|2227
30RB|1|a|G|2228

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2

Chain h

Large ribosomal subunit protein bL9

Chain w

Large ribosomal subunit protein bL28