J3_3BBX_010
3D structure
- PDB id
- 3BBX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 10 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 3BBX|1|B|U|2833, 3BBX|1|B|A|2835, 3BBX|1|B|U|2884
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3BBX_010 not in the Motif Atlas
- Homologous match to J3_5J7L_048
- Geometric discrepancy: 0.2383
- The information below is about J3_5J7L_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64069.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
3BBX|1|B|G|2812
3BBX|1|B|A|2813
3BBX|1|B|A|2814
3BBX|1|B|C|2815
*
3BBX|1|B|G|2831
3BBX|1|B|U|2832
3BBX|1|B|U|2833
3BBX|1|B|G|2834
3BBX|1|B|A|2835
3BBX|1|B|U|2836
*
3BBX|1|B|A|2882
3BBX|1|B|A|2883
3BBX|1|B|U|2884
3BBX|1|B|G|2885
3BBX|1|B|A|2886
3BBX|1|B|A|2887
3BBX|1|B|C|2888
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L17
Coloring options: