J3_3CCL_001
3D structure
- PDB id
- 3CCL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAC*GUGUCAG*CAG
- Length
- 15 nucleotides
- Bulged bases
- 3CCL|1|0|A|272
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3CCL_001 not in the Motif Atlas
- Homologous match to J3_4V9F_001
- Geometric discrepancy: 0.0514
- The information below is about J3_4V9F_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_96248.1
- Basepair signature
- cWW-tHW-F-tHS-cSS-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
3CCL|1|0|C|240
3CCL|1|0|A|241
3CCL|1|0|A|242
3CCL|1|0|A|243
3CCL|1|0|C|244
*
3CCL|1|0|G|267
3CCL|1|0|U|268
3CCL|1|0|G|269
3CCL|1|0|U|270
3CCL|1|0|C|271
3CCL|1|0|A|272
3CCL|1|0|G|273
*
3CCL|1|0|C|377
3CCL|1|0|A|378
3CCL|1|0|G|379
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain F
- 50S ribosomal protein L7Ae
- Chain M
- 50S ribosomal protein L15e
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