J3_3CCR_001

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAAC*GUGUCAG*CAG

Length

15 nucleotides

Bulged bases

3CCR|1|0|A|272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3CCR_001 not in the Motif Atlas

Homologous match to J3_4V9F_001

Geometric discrepancy: 0.058

The information below is about J3_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_96248.1

Basepair signature

cWW-tHW-F-tHS-cSS-cWW-F-cWW-F-F

Number of instances in this motif group

2

Unit IDs

3CCR|1|0|C|240
3CCR|1|0|A|241
3CCR|1|0|A|242
3CCR|1|0|A|243
3CCR|1|0|C|244
*
3CCR|1|0|G|267
3CCR|1|0|U|268
3CCR|1|0|G|269
3CCR|1|0|U|270
3CCR|1|0|C|271
3CCR|1|0|A|272
3CCR|1|0|G|273
*
3CCR|1|0|C|377
3CCR|1|0|A|378
3CCR|1|0|G|379

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain F

50S ribosomal protein L7Ae

Chain M

50S ribosomal protein L15e