J3_3CCS_016
3D structure
- PDB id
- 3CCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CUCG*CGAUAGUGAACAAGUAG*CGAACG
- Length
- 27 nucleotides
- Bulged bases
- 3CCS|1|0|C|31, 3CCS|1|0|U|454, 3CCS|1|0|A|462
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3CCS_016 not in the Motif Atlas
- Homologous match to J3_4V9F_013
- Geometric discrepancy: 0.0304
- The information below is about J3_4V9F_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
3CCS|1|0|C|29
3CCS|1|0|U|30
3CCS|1|0|C|31
3CCS|1|0|G|32
*
3CCS|1|0|C|451
3CCS|1|0|G|452
3CCS|1|0|A|453
3CCS|1|0|U|454
3CCS|1|0|A|455
3CCS|1|0|G|456
3CCS|1|0|U|457
3CCS|1|0|G|458
3CCS|1|0|A|459
3CCS|1|0|A|460
3CCS|1|0|C|461
3CCS|1|0|A|462
3CCS|1|0|A|463
3CCS|1|0|G|464
3CCS|1|0|U|465
3CCS|1|0|A|466
3CCS|1|0|G|467
*
3CCS|1|0|C|474
3CCS|1|0|G|475
3CCS|1|0|A|476
3CCS|1|0|A|477
3CCS|1|0|C|478
3CCS|1|0|G|479
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L37e
- Chain 2
- 50S ribosomal protein L39e
- Chain C
- 50S ribosomal protein L4P
- Chain T
- 50S ribosomal protein L24P
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