J3_3J77_024
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J77_024 not in the Motif Atlas
- Homologous match to J3_8C3A_008
- Geometric discrepancy: 0.3855
- The information below is about J3_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_18654.1
- Basepair signature
- cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
3J77|1|2S|A|2432
3J77|1|2S|U|2433
3J77|1|2S|U|2434
3J77|1|2S|G|2435
*
3J77|1|2S|C|2512
3J77|1|2S|U|2513
3J77|1|2S|U|2514
3J77|1|2S|A|2515
3J77|1|2S|U|2516
3J77|1|2S|U|2517
*
3J77|1|2S|A|2590
3J77|1|2S|A|2591
3J77|1|2S|G|2592
3J77|1|2S|A|2593
3J77|1|2S|C|2594
3J77|1|2S|A|2595
3J77|1|2S|U|2596
3J77|1|2S|U|2597
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 65
- 60S ribosomal protein L15
- Chain 86
- 60S ribosomal protein L36
- Chain L2
- 60S ribosomal protein L2
- Chain L8
- 60S ribosomal protein L8
Coloring options: