J3_3J7P_023
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UG*UGUC*GAUAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J7P_023 not in the Motif Atlas
- Homologous match to J3_8C3A_085
- Geometric discrepancy: 0.1742
- The information below is about J3_8C3A_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76043.2
- Basepair signature
- cWW-F-F-F-F-tSS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
3J7P|1|S2|U|1350
3J7P|1|S2|G|1351
*
3J7P|1|S2|U|1360
3J7P|1|S2|G|1361
3J7P|1|S2|U|1362
3J7P|1|S2|C|1363
*
3J7P|1|S2|G|1375
3J7P|1|S2|A|1376
3J7P|1|S2|U|1377
3J7P|1|S2|A|1378
3J7P|1|S2|A|1379
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SA
- Ribosomal protein uS2
- Chain SC
- Ribosomal protein uS5
- Chain SR
- Ribosomal protein eS17
Coloring options: