J3_3J7Y_005
3D structure
- PDB id
- 3J7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large ribosomal subunit from human mitochondria
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 3J7Y|1|A|A|3005, 3J7Y|1|A|U|3006
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J7Y_005 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.1164
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
3J7Y|1|A|C|3004
3J7Y|1|A|A|3005
3J7Y|1|A|U|3006
3J7Y|1|A|C|3007
*
3J7Y|1|A|G|3032
3J7Y|1|A|U|3033
3J7Y|1|A|U|3034
*
3J7Y|1|A|A|3048
3J7Y|1|A|U|3049
3J7Y|1|A|U|3050
3J7Y|1|A|A|3051
3J7Y|1|A|A|3052
3J7Y|1|A|A|3053
3J7Y|1|A|G|3054
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- uL3
- Chain L
- uL14
- Chain r
- bS18a
Coloring options: