J3_3J7Z_004

3D structure

PDB id

3J7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli 50S subunit with ErmCL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3J7Z_004 not in the Motif Atlas

Homologous match to J3_5J7L_041

Geometric discrepancy: 0.0895

The information below is about J3_5J7L_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

3J7Z|1|A|C|1298
3J7Z|1|A|G|1299
3J7Z|1|A|G|1300
3J7Z|1|A|A|1301
3J7Z|1|A|A|1302
3J7Z|1|A|G|1303
*
3J7Z|1|A|C|1625
3J7Z|1|A|A|1626
3J7Z|1|A|G|1627
*
3J7Z|1|A|C|1639
3J7Z|1|A|A|1640
3J7Z|1|A|A|1641
3J7Z|1|A|G|1642

Current chains

Chain A

23S rRNA

Nearby chains