J3_3J8G_024
3D structure
- PDB id
- 3J8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- UGAUCUA*UGG*CAAA
- Length
- 14 nucleotides
- Bulged bases
- 3J8G|1|B|U|686, 3J8G|1|B|A|792, 3J8G|1|B|A|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J8G_024 not in the Motif Atlas
- Homologous match to J3_4WF9_002
- Geometric discrepancy: 0.232
- The information below is about J3_4WF9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
3J8G|1|B|U|683
3J8G|1|B|G|684
3J8G|1|B|A|685
3J8G|1|B|U|686
3J8G|1|B|C|687
3J8G|1|B|U|688
3J8G|1|B|A|689
*
3J8G|1|B|U|773
3J8G|1|B|G|774
3J8G|1|B|G|775
*
3J8G|1|B|C|791
3J8G|1|B|A|792
3J8G|1|B|A|793
3J8G|1|B|A|794
Current chains
- Chain B
- 23S rRNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
- Chain E
- 50S ribosomal protein L4
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