J3_3J9Z_029
3D structure
- PDB id
- 3J9Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 3J9Z|1|LA|U|448, 3J9Z|1|LA|C|456, 3J9Z|1|LA|A|472
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J9Z_029 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.1819
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.1
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 10
Unit IDs
3J9Z|1|LA|C|32
3J9Z|1|LA|C|33
3J9Z|1|LA|U|34
3J9Z|1|LA|G|35
*
3J9Z|1|LA|C|445
3J9Z|1|LA|G|446
3J9Z|1|LA|A|447
3J9Z|1|LA|U|448
3J9Z|1|LA|A|449
3J9Z|1|LA|G|450
3J9Z|1|LA|U|451
3J9Z|1|LA|G|452
3J9Z|1|LA|A|453
3J9Z|1|LA|A|454
3J9Z|1|LA|C|455
3J9Z|1|LA|C|456
3J9Z|1|LA|A|457
3J9Z|1|LA|G|458
3J9Z|1|LA|U|459
3J9Z|1|LA|A|460
3J9Z|1|LA|C|461
*
3J9Z|1|LA|G|468
3J9Z|1|LA|G|469
3J9Z|1|LA|A|470
3J9Z|1|LA|A|471
3J9Z|1|LA|A|472
3J9Z|1|LA|G|473
Current chains
- Chain LA
- 23S ribosomal RNA
Nearby chains
- Chain L3
- 50S ribosomal protein L34
- Chain L6
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L20
- Chain LR
- 50S ribosomal protein L23
Coloring options: