J3_3JA1_020
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 3JA1|1|SA|A|975, 3JA1|1|SA|G|976, 3JA1|1|SA|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JA1_020 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.1927
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
3JA1|1|SA|U|955
3JA1|1|SA|U|956
3JA1|1|SA|U|957
3JA1|1|SA|A|958
3JA1|1|SA|A|959
3JA1|1|SA|U|960
3JA1|1|SA|U|961
3JA1|1|SA|C|962
*
3JA1|1|SA|G|973
3JA1|1|SA|A|974
3JA1|1|SA|A|975
3JA1|1|SA|G|976
3JA1|1|SA|A|977
3JA1|1|SA|A|978
3JA1|1|SA|C|979
3JA1|1|SA|C|980
3JA1|1|SA|U|981
3JA1|1|SA|U|982
3JA1|1|SA|A|983
3JA1|1|SA|C|984
*
3JA1|1|SA|G|1221
3JA1|1|SA|G|1222
3JA1|1|SA|C|1223
3JA1|1|SA|U|1224
3JA1|1|SA|A|1225
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain S3
- Elongation factor G
- Chain SJ
- 30S ribosomal protein S10
- Chain SM
- 30S ribosomal protein S13
- Chain SN
- 30S ribosomal protein S14
- Chain SS
- 30S ribosomal protein S19
Coloring options: