J3_3JA1_034
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGG*CUUGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 3JA1|1|SA|U|653
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JA1_034 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.1879
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.5
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
3JA1|1|SA|C|586
3JA1|1|SA|G|587
3JA1|1|SA|G|588
*
3JA1|1|SA|C|651
3JA1|1|SA|U|652
3JA1|1|SA|U|653
3JA1|1|SA|G|654
3JA1|1|SA|A|655
*
3JA1|1|SA|U|751
3JA1|1|SA|G|752
3JA1|1|SA|A|753
3JA1|1|SA|C|754
3JA1|1|SA|G|755
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SH
- 30S ribosomal protein S8
- Chain SL
- 30S ribosomal protein S12
- Chain SO
- 30S ribosomal protein S15
- Chain SQ
- 30S ribosomal protein S17
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