J3_3JAH_017
3D structure
- PDB id
- 3JAH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.45 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 3JAH|1|8|A|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JAH_017 not in the Motif Atlas
- Homologous match to J3_8C3A_060
- Geometric discrepancy: 0.1842
- The information below is about J3_8C3A_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38265.2
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F
- Number of instances in this motif group
- 8
Unit IDs
3JAH|1|8|A|44
3JAH|1|8|C|45
*
3JAH|1|8|G|58
3JAH|1|8|A|59
3JAH|1|8|G|60
3JAH|1|8|A|61
3JAH|1|8|A|62
3JAH|1|8|U|63
3JAH|1|8|U|64
*
3JAH|1|8|A|95
3JAH|1|8|C|96
3JAH|1|8|A|97
3JAH|1|8|C|98
3JAH|1|8|U|99
Current chains
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- uL23
- Chain h
- uL29
- Chain j
- eL37
- Chain l
- eL39
Coloring options: