J3_3JAH_026
3D structure
- PDB id
- 3JAH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.45 Å
Loop
- Sequence
- CCGGAC*GGGUG*UUAGAUG
- Length
- 18 nucleotides
- Bulged bases
- 3JAH|1|9|G|1507, 3JAH|1|9|U|1509
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JAH_026 not in the Motif Atlas
- Homologous match to J3_4V88_038
- Geometric discrepancy: 0.1502
- The information below is about J3_4V88_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_75993.1
- Basepair signature
- cWW-tWH-F-F-tHS-cWW-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
3JAH|1|9|C|1272
3JAH|1|9|C|1273
3JAH|1|9|G|1274
3JAH|1|9|G|1275
3JAH|1|9|A|1276
3JAH|1|9|C|1277
*
3JAH|1|9|G|1320
3JAH|1|9|G|1321
3JAH|1|9|G|1322
3JAH|1|9|U|1323
3JAH|1|9|G|1324
*
3JAH|1|9|U|1504
3JAH|1|9|U|1505
3JAH|1|9|A|1506
3JAH|1|9|G|1507
3JAH|1|9|A|1508
3JAH|1|9|U|1509
3JAH|1|9|G|1510
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain KK
- eS10
- Chain dd
- uS14
- Chain ff
- eS31
- Chain ii
- eRF1
Coloring options: