J3_3JBV_035
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- GCAG*CGAAC*GAUGAC
- Length
- 15 nucleotides
- Bulged bases
- 3JBV|1|b|A|764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3JBV_035 not in the Motif Atlas
- Geometric match to J3_5TBW_005
- Geometric discrepancy: 0.3244
- The information below is about J3_5TBW_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_33851.1
- Basepair signature
- cWW-tSH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
3JBV|1|b|G|697
3JBV|1|b|C|698
3JBV|1|b|A|699
3JBV|1|b|G|700
*
3JBV|1|b|C|732
3JBV|1|b|G|733
3JBV|1|b|A|734
3JBV|1|b|A|735
3JBV|1|b|C|736
*
3JBV|1|b|G|760
3JBV|1|b|A|761
3JBV|1|b|U|762
3JBV|1|b|G|763
3JBV|1|b|A|764
3JBV|1|b|C|765
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain c
- 50S ribosomal protein L2
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