J3_3OW2_001

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAAAC*GUGUCAG*CAG

Length

15 nucleotides

Bulged bases

3OW2|1|0|A|272

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_001 not in the Motif Atlas

Homologous match to J3_4V9F_001

Geometric discrepancy: 0.0609

The information below is about J3_4V9F_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_96248.1

Basepair signature

cWW-tHW-F-tHS-cSS-cWW-F-cWW-F-F

Number of instances in this motif group

2

Unit IDs

3OW2|1|0|C|240
3OW2|1|0|A|241
3OW2|1|0|A|242
3OW2|1|0|A|243
3OW2|1|0|C|244
*
3OW2|1|0|G|267
3OW2|1|0|U|268
3OW2|1|0|G|269
3OW2|1|0|U|270
3OW2|1|0|C|271
3OW2|1|0|A|272
3OW2|1|0|G|273
*
3OW2|1|0|C|377
3OW2|1|0|A|378
3OW2|1|0|G|379

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain F

50S ribosomal protein L7Ae

Chain L

50S ribosomal protein L15e