J3_3OW2_004

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGA*UCUAAGA*UAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_004 not in the Motif Atlas

Homologous match to J3_5D8H_001

Geometric discrepancy: 0.1526

The information below is about J3_5D8H_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

3OW2|1|0|G|1159
3OW2|1|0|G|1160
3OW2|1|0|A|1161
*
3OW2|1|0|U|1185
3OW2|1|0|C|1186
3OW2|1|0|U|1187
3OW2|1|0|A|1188
3OW2|1|0|A|1189
3OW2|1|0|G|1190
3OW2|1|0|A|1191
*
3OW2|1|0|U|1206
3OW2|1|0|A|1207
3OW2|1|0|C|1208

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain G

50S ribosomal protein L10E