J3_3OW2_006

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UAAG*CGAGAAC*GUG

Length

14 nucleotides

Bulged bases

3OW2|1|0|G|1683, 3OW2|1|0|A|1684

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_006 not in the Motif Atlas

Homologous match to J3_4V9F_006

Geometric discrepancy: 0.0534

The information below is about J3_4V9F_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_19545.2

Basepair signature

cWW-F-F-tHS-cWW-cWW-F-F

Number of instances in this motif group

6

Unit IDs

3OW2|1|0|U|1412
3OW2|1|0|A|1413
3OW2|1|0|A|1414
3OW2|1|0|G|1415
*
3OW2|1|0|C|1680
3OW2|1|0|G|1681
3OW2|1|0|A|1682
3OW2|1|0|G|1683
3OW2|1|0|A|1684
3OW2|1|0|A|1685
3OW2|1|0|C|1686
*
3OW2|1|0|G|1695
3OW2|1|0|U|1696
3OW2|1|0|G|1697

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L39e

Chain Z

50S ribosomal protein L37e