J3_3OW2_009

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CAUC*GUGA*UAUUAAAG

Length

16 nucleotides

Bulged bases

3OW2|1|0|A|2553, 3OW2|1|0|U|2554

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_009 not in the Motif Atlas

Homologous match to J3_4V9F_009

Geometric discrepancy: 0.0313

The information below is about J3_4V9F_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68010.1

Basepair signature

cWW-cWH-cWW-cSS-tWH-tSS-F-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

3OW2|1|0|C|2552
3OW2|1|0|A|2553
3OW2|1|0|U|2554
3OW2|1|0|C|2555
*
3OW2|1|0|G|2580
3OW2|1|0|U|2581
3OW2|1|0|G|2582
3OW2|1|0|A|2583
*
3OW2|1|0|U|2595
3OW2|1|0|A|2596
3OW2|1|0|U|2597
3OW2|1|0|U|2598
3OW2|1|0|A|2599
3OW2|1|0|A|2600
3OW2|1|0|A|2601
3OW2|1|0|G|2602

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain I

50S ribosomal protein L13P

Chain J

50S ribosomal protein L14P