J3_3OW2_019

3D structure

PDB id

3OW2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Enhanced Macrolide Bound to 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GCC*GUCUAGCGAACC*GAUGAC

Length

21 nucleotides

Bulged bases

3OW2|1|0|A|2425, 3OW2|1|0|A|2463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_3OW2_019 not in the Motif Atlas

Homologous match to J3_4V9F_018

Geometric discrepancy: 0.0421

The information below is about J3_4V9F_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44792.1

Basepair signature

cWW-F-tHH-cWW-tHW-F-F-cWW-F-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

3OW2|1|0|G|2316
3OW2|1|0|C|2317
3OW2|1|0|C|2318
*
3OW2|1|0|G|2421
3OW2|1|0|U|2422
3OW2|1|0|C|2423
3OW2|1|0|U|2424
3OW2|1|0|A|2425
3OW2|1|0|G|2426
3OW2|1|0|C|2427
3OW2|1|0|G|2428
3OW2|1|0|A|2429
3OW2|1|0|A|2430
3OW2|1|0|C|2431
3OW2|1|0|C|2432
*
3OW2|1|0|G|2459
3OW2|1|0|A|2460
3OW2|1|0|U|2461
3OW2|1|0|G|2462
3OW2|1|0|A|2463
3OW2|1|0|C|2464

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 2

50S ribosomal protein L44E

Chain K

50S ribosomal protein L15P

Chain P

50S ribosomal protein L21e