J3_3R8N_018
3D structure
- PDB id
- 3R8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 3R8N|1|A|U|871, 3R8N|1|A|A|873
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3R8N_018 not in the Motif Atlas
- Geometric match to J3_5J7L_004
- Geometric discrepancy: 0.0728
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
3R8N|1|A|C|826
3R8N|1|A|U|827
3R8N|1|A|U|828
3R8N|1|A|G|829
*
3R8N|1|A|C|857
3R8N|1|A|G|858
3R8N|1|A|G|859
3R8N|1|A|A|860
3R8N|1|A|G|861
*
3R8N|1|A|C|868
3R8N|1|A|G|869
3R8N|1|A|U|870
3R8N|1|A|U|871
3R8N|1|A|A|872
3R8N|1|A|A|873
3R8N|1|A|G|874
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain H
- 30S ribosomal protein S8
- Chain U
- 30S ribosomal protein S21
Coloring options: