J3_4B3R_016

3D structure

PDB id

4B3R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 30

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4B3R|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4B3R_016 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1443

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4B3R|1|A|C|990
4B3R|1|A|U|991
4B3R|1|A|U|992
4B3R|1|A|G|993
4B3R|1|A|A|994
4B3R|1|A|C|995
4B3R|1|A|A|996
4B3R|1|A|U|997
*
4B3R|1|A|A|1044
4B3R|1|A|C|1045
4B3R|1|A|A|1046
4B3R|1|A|G|1047
*
4B3R|1|A|C|1210
4B3R|1|A|U|1211
4B3R|1|A|U|1212
4B3R|1|A|A|1213
4B3R|1|A|C|1214
4B3R|1|A|G|1215

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain N

30S RIBOSOMAL PROTEIN S14 TYPE Z