J3_4B3T_016

3D structure

PDB id

4B3T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 30S ribosome in complex with compound 39

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4B3T|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4B3T_016 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1658

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4B3T|1|A|C|990
4B3T|1|A|U|991
4B3T|1|A|U|992
4B3T|1|A|G|993
4B3T|1|A|A|994
4B3T|1|A|C|995
4B3T|1|A|A|996
4B3T|1|A|U|997
*
4B3T|1|A|A|1044
4B3T|1|A|C|1045
4B3T|1|A|A|1046
4B3T|1|A|G|1047
*
4B3T|1|A|C|1210
4B3T|1|A|U|1211
4B3T|1|A|U|1212
4B3T|1|A|A|1213
4B3T|1|A|C|1214
4B3T|1|A|G|1215

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain N

30S RIBOSOMAL PROTEIN S14 TYPE Z